package de.ugoe.cs.eventbench.commands; import java.security.InvalidParameterException; import java.util.ArrayList; import java.util.Collection; import java.util.HashSet; import java.util.LinkedHashSet; import java.util.LinkedList; import java.util.List; import java.util.Random; import java.util.Set; import de.ugoe.cs.eventbench.data.Event; import de.ugoe.cs.eventbench.data.GlobalDataContainer; import de.ugoe.cs.eventbench.models.IStochasticProcess; import de.ugoe.cs.util.console.Command; import de.ugoe.cs.util.console.Console; /** *

* Command to generate all sequences of a given length. *

* * @author Steffen Herbold * @version 1.0 */ public class CMDgenerateFixedLengthSequences implements Command { /* * (non-Javadoc) * * @see de.ugoe.cs.util.console.Command#run(java.util.List) */ @Override public void run(List parameters) { String modelname; String sequencesName; int minLength; int maxLength; boolean all = true; int numSequences = -1; try { modelname = (String) parameters.get(0); sequencesName = (String) parameters.get(1); minLength = Integer.parseInt((String) parameters.get(2)); maxLength = Integer.parseInt((String) parameters.get(3)); if (parameters.size() >= 5) { all = Boolean.parseBoolean((String) parameters.get(4)); } if (parameters.size() == 6) { numSequences = Integer.parseInt((String) parameters.get(5)); } } catch (Exception e) { throw new InvalidParameterException(); } IStochasticProcess model = null; Object dataObject = GlobalDataContainer.getInstance() .getData(modelname); if (dataObject == null) { Console.println("Model " + modelname + " not found in storage."); return; } else if (!(dataObject instanceof IStochasticProcess)) { Console.println("Object " + modelname + " not of type MarkovModel!"); return; } model = (IStochasticProcess) dataObject; Collection>> sequences = new LinkedHashSet>>(); for (int length = minLength; length <= maxLength; length++) { sequences.addAll(model.generateValidSequences(length + 2)); } Console.traceln("" + sequences.size() + " possible"); if (!all && numSequences < sequences.size()) { List probabilities = new ArrayList(sequences.size()); double probSum = 0.0; for (List> sequence : sequences) { double prob = model.getProbability(sequence); probabilities.add(prob); probSum += prob; } Set drawnSequences = new HashSet(numSequences); Random r = new Random(); while (drawnSequences.size() < numSequences) { double randVal = r.nextDouble() * probSum; double sum = 0.0d; int index = -1; while (sum < randVal) { index++; double currentProb = probabilities.get(index); sum += currentProb; } if (!drawnSequences.contains(index)) { drawnSequences.add(index); probSum -= probabilities.get(index); probabilities.set(index, 0.0d); } } Collection>> retainedSequences = new LinkedList>>(); int index = 0; for (List> sequence : sequences) { if (drawnSequences.contains(index)) { retainedSequences.add(sequence); } index++; } sequences = retainedSequences; } if (GlobalDataContainer.getInstance().addData(sequencesName, sequences)) { Console.traceln("Old data \"" + sequencesName + "\" overwritten"); } Console.println("" + sequences.size() + " sequences generated"); } /* * (non-Javadoc) * * @see de.ugoe.cs.util.console.Command#help() */ @Override public void help() { Console.println("Usage: generateFixedLengthSequences {} {}"); } }